Familial Hypercholesterolemia

Familial Hypercholesterolemia (FH) is typically an autosomal dominant disease causing elevated plasma LDL and increased risk of coronary
heart disease. 

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Familial Hypercholesterolemia (FH) is typically an autosomal dominant disease causing elevated plasma LDL and increased risk of coronary
heart disease. 

The majority of autosomal dominant FH cases are associated with loss-of-function mutations in the low-density lipoprotein receptor gene LDLR. APOB gene testing can detect mutations that contribute to another type of Familial Hypercholesterolemia known as familial defective apolipoprotein B-100, while mutations in the PCSK9 gene contribute to autosomal dominant hypercholesterolemia 3.

The Familial Hypercholesterolemia AMPLIFIED™ test includes concurrent gene sequence analysis of the LDLR gene, PCSK9 genes and and exon 26 of the APOB gene, with reflex to Deletion/Duplication Analysis of LDLR. It detects approximately 99% of described mutations in LDLRand PCSK9, and more than 80% of the described mutations in APOB causing FH. Test components are also available individually.

Disease Name 
Familial Hypercholesterolemia
Disease Information 

Familial hypercholesterolemia (FH) is typically an autosomal dominant disease characterized by the presence of high levels of plasma LDL (low density lipoproteins) cholesterol in the body, increasing the risk for premature coronary heart disease (CHD) and myocardial infarction.1 The majority of autosomal dominant FH cases are associated with loss-of- function mutations in the gene for the low-density lipoprotein receptor (LDLR).2 Affected individuals present high levels of plasma LDL cholesterol, which increases the risk of premature coronary artery disease, myocardial infarction, and atherosclerotic plaque formation. Defective LDL-receptors cause deposition of cholesterol in different parts of the body causing diseases such as xanthelasma (skin), xanthomas (tendons), and coronary arteries (atherosclerosis).3, 4

There are approximately 1 in 500 individuals with heterozygous LDLR mutations and 1 in a million individuals with homozygous mutations in the general population.1, 2 Heterozygotes present a 2- to 3- fold elevation in plasma LDL-cholesterol and develop symptoms such as tendinous xanthomas, corneal arcus, and premature coronary artery disease.2,4 Homozygotes also present planar xanthomas, with plasma LDLcholesterol increases 6- to 8-fold, and death from myocardial infarctions during the first two decades of life is common.5 As a result of founder effect, FH is much more common in some population groups such as French Canadians, Afrikaners, Lebanese, Finns, and Ashkenazi Jews.6

In addition to mutations in the LDLR gene, mutations in the APOB and PCSK9 genes contribute to two other types of familial hypercholesterolemia known as familial defective apolipoprotein B-100 (FDB)3, 7 and autosomal dominant hypercholesterolemia 3 (HCHOLA3), respectively. Apolipoprotein B-100 (APOB) is the major component of low density lipoproteins (LDL) and plays a crucial role in the binding of LDL with LDL receptors.7 These APOB mutations fall within the receptor binding domain of the gene and decrease the binding efficiency of lipoproteins with LDL receptors, leading to the accumulation of plasma LDL in FDB.

Proprotein convertase subtilisin kexin type 9 (PCSK9) is serine protease mainly expressed in the liver and the intestine, that acts as a chaperone that binds the LDLR, targeting it for internalization and degradation.9 PCSK9 can also act on the LDLR after biosynthesis before it reaches the basolateral surface of the cell.10 Gain-of-function mutations in PCSK9 lead to a reduction in LDLR levels, therefore causing hypercholesterolemia11; while loss-of-function mutations are associated with a reduction of plasma LDL cholesterol level.12 PCSK9 SNPs are unequally distributed in different ethnic groups. Besides the rare mutations implicated in ADH, some variants are functionally relevant in cholesterol regulation and their distribution and impact vary in different populations.13

Proper diet, exercise, and certain medications can aid in the treatment of FH. Heterozygous patients usually respond well with a combination of diet change and drugs (e.g. statins), while in some cases, surgery such as a liver transplant might be needed for homozygous patients.8 Proactive diagnosis, in combination with selective treatments, will help to decrease incidence and progression of FH and FDB effects.

Testing Benefits & Indication 

Early diagnostic testing for individuals known or suspected to have Familial Hypercholesterolemia can help guide medical management and may decrease the risks associated with FH. Carrier screening for relatives of FH patients, at risk pregnancies, and carrier testing for known familial mutations can also guide medical decision making and may decrease the risk of known hypercholesterolemia effects.

Test Description 

LDLR exons 1-18 plus at least 20 bases into the 5’ and 3’ ends of all the introns are analyzed. For APOB sequence analysis, a 708 base pair fragment of APOB exon 26 containing the most frequently occurring mutations associated with FH is analyzed. PCSK9 exons 1-12 plus at least 50 bases into the 5’ and 3’ ends of all the introns are analyzed. 

Mutation Detection Rate 

The Ambry Test: Familial Hypercholesterolemia AMPLIFIED is designed and validated to be capable of detecting > 99% of described mutations in LDLR and PCSK9 (considering less than 1% to be the other types of mutations) and > 80% of described mutations in APOB relevant for FH.

Specimen Requirements 

Blood: Collect 3-5 cc from adult or 2 cc minimum from child into EDTA purple-top tube (first choice) or ACD yellow-top tube (second choice). Store at room temperature or refrigerate. Ship at room temperature.
Blood Spot: Call for availability.
Saliva: Collect 2 ml into Oragene™ DNA Self-Collection container. Store and ship at room temperature.
DNA: Send 20 μg in TE at 50-100 ng/μl. Store frozen and ship on ice or dry ice.
Prenatal: Prenatal testing is available. Please call an Ambry Genetic Counselor to discuss your case.

Billing Codes 
Test Code Technique CPT Codes
2780 LDLR Gene Sequence Analysis 83891x1, 83894x18, 83898x17, 83904x20, 83909x20, 83912x1
2784 LDLR Deletion / Duplication Analysis 83891x1, 83894x1, 83900x1, 83901x18, 83909x1, 83912x1
2786 LDLR Gene Sequence Analysis and Deletion / Duplication 83891x1, 83894x18, 83898x17, 83900x1, 83901x18, 83904x27, 83909x27, 83912x2
2800 APOB Partial Gene Analysis 83891x1, 83894x2, 83898x1, 83904x2, 83909x2, 83912x1
2804 PCSK9 Gene Sequence Analysis 83891x1, 83894x12, 83898x11, 83904x22, 83909x22, 83912x1
8580 ADH Autosomal Dominant Hypercholesterolemia (LDLR Gene Sequence Analysis and APOB Partial Gene Sequence Analysis) 83891x1, 83894x19, 83898x18, 83904x25, 83909x25, 83912x1
8582 FH LDLR Gene Sequence Analysis and APOB Partial Gene Sequence Analysis Reflex Option to LDLR Deletion / Duplication 83891x1, 83894x19, 83898x18, 83904x27, 83900x1, 83901x18, 83909x27, 83912x2
8680 FH Comprehensive (LDLR Gene Sequence Analysis and APOB Partial Gene Sequence Analysis Reflex Option to LDLR Deletion / Duplication and Reflex Option to PCSK9) 83891x1, 83894x30, 83898x29, 83904x58, 83900x1, 83901x18, 83909x58, 83912x3

 

Turnaround Time 
Technique Days
LDLR Gene Sequence Analysis 10-21
LDLR Deletion / Duplication Analysis 7-14
LDLR Gene Sequence Analysis and Deletion / Duplication 14-21
APOB Partial Gene Analysis 10-21
PCSK9 Gene Sequence Analysis 10-21
ADH Autosomal Dominant Hypercholesterolemia (LDLR Gene Sequence Analysis and APOB Partial Gene Sequence Analysis) 14-28
FH LDLR Gene Sequence Analysis and APOB Partial Gene Sequence Analysis Reflex Option to LDLR Deletion / Duplication 14-35
FH Comprehensive (LDLR Gene Sequence Analysis and APOB Partial Gene Sequence Analysis Reflex Option to LDLR Deletion / Duplication and Reflex Option to PCSK9) 14-42

 

Genes 
References 

1 Hopkins PN. International Journal of Cardiology 2003;89: 13-23.
2 Hobbs H et al. Annu. Rev. Genet. 1990;24:133-70.
3 Schmidt HH et al. J Clin Endocrinol Metab. 1998 Jun;83(6):2167-74.
4 Varret M et al. Clin Genet 2008: 73: 1–13.
5 Bertolini S et al. Arterioscler. Thromb. Vasc. Biol. 1999;19;408-418.
6 Austin M et al. Am J Epidemiol 2004;160:407–420.
7 Liyanage KE et al. Ann Clin Biochem 2008; 45: 170–176.
8 Rader DJ et al. J. Clin. Invest. 2003; 111: 1795–1803
9 Lagace TA et al. J Clin Invest. 2006; 116: 2995-3005.
10 Park SW et al. J Biol Chem 2004; 279: 50630-8.
11 Maxwell KN et al. Proc Natl Acad Sci USA 2005; 102: 2069-74.
12 Cohen JA et al. Nat Genet 2005; 37: 161-5.
13 Abifadel et al. Hum Mutat 2009; 30:520-9.